
I would like to store and query GIS data, I saw that MariaDB can support that, but I'm not sure how to work with it via Appwrite

Appwrite uses the Utopia-PHP database module is "hiding" the fact that MariaDB is the database for being able to use universal DB adapter. as of such you won't be able to use all MariaDB features GIS is one of them.
Check Steven's article about using Appwrite with location
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